Human vs Algerian mouse Synteny results
The syntenic regions between Human (Homo sapiens, GRCh38) and Algerian mouse (Mus spretus, SPRET_EiJ_v1) were extracted from their pairwise alignment in Ensembl release 86. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 369 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Human |
Uncovered: 376,829,829 out of 3,096,649,726 |
Uncovered: 1,190,209 out of 35,628,222 |
| Algerian mouse |
Uncovered: 116,473,504 out of 2,625,571,169 |
Uncovered: 673,007 out of 33,001,570 |