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Ensembl Species

Note: to find out which species were in previous releases, please see the table of assemblies

Common nameScientific nameTaxon IDEnsembl AssemblyAccessionGenebuild MethodVariation databaseRegulation databasePre assembly
AardvarkAardvark
(Pre)
Orycteropus afer afer1230840-----OryAfe1
AlpacaAlpacaVicugna pacos30538vicPac1-Projection build---
Amazon mollyAmazon mollyPoecilia formosa48698Poecilia_formosa-5.1.2GCA_000485575.1Full genebuild---
Anole lizardAnole lizardAnolis carolinensis28377AnoCar2.0GCA_000090745.1Full genebuild---
ArmadilloArmadilloDasypus novemcinctus9361Dasnov3.0GCA_000208655.2Mixed strategy build---
BudgerigarBudgerigar
(Pre)
Melopsittacus undulatus13146-----MelUnd6.3
BushbabyBushbabyOtolemur garnettii30611OtoGar3GCA_000181295.3Full genebuild---
C.intestinalisC.intestinalisCiona intestinalis7719KHGCA_000224145.1Full genebuild-Y-
C.savignyiC.savignyiCiona savignyi51511CSAV 2.0-Full genebuild---
C. elegansC. elegansCaenorhabditis elegans6239WBcel235GCA_000002985.3Import-Y-
CatCatFelis catus9685Felis_catus_6.2GCA_000181335.2Mixed strategy buildY--
Cave fishCave fishAstyanax mexicanus7994AstMex102GCA_000372685.1Full genebuild---
ChickenChickenGallus gallus9031Gallus_gallus-5.0GCA_000002315.3Full genebuildYY-
ChimpanzeeChimpanzeePan troglodytes9598CHIMP2.1.4GCA_000001515.4Full genebuildYY-
Chinese hamsterChinese hamster
(Pre)
Cricetulus griseus10029-----CriGRi_1.0
Chinese softshell turtleChinese softshell turtlePelodiscus sinensis13735PelSin_1.0GCA_000230535.1Mixed strategy build---
CodCodGadus morhua8049gadMor1-Mixed strategy build---
CoelacanthCoelacanthLatimeria chalumnae7897LatCha1GCA_000225785.1Full genebuild---
CowCowBos taurus9913UMD3.1GCA_000003055.3Full genebuildYY-
Crab eating-macaqueCrab eating-macaque
(Pre)
Macaca fascicularis9541-----MacFas_5.0
DogDogCanis lupus familiaris9615CanFam3.1GCA_000002285.2Full genebuildYY-
DolphinDolphinTursiops truncatus9739turTru1-Projection build---
DolphinDolphin
(Pre)
Tursiops truncatus9739-----Ttru14
DuckDuckAnas platyrhynchos8839BGI_duck_1.0GCA_000355885.1Full genebuild---
ElephantElephantLoxodonta africana9785Loxafr3.0GCA_000001905.1Full genebuild---
FerretFerretMustela putorius furo9669MusPutFur1.0GCA_000215625.1Mixed strategy build---
FlycatcherFlycatcherFicedula albicollis59894FicAlb_1.4GCA_000247815.1Full genebuild---
FruitflyFruitflyDrosophila melanogaster7227BDGP6GCA_000001215.4ImportYY-
FuguFuguTakifugu rubripes31033FUGU 4.0-Full genebuild---
FuguFugu
(Pre)
Takifugu rubripes31033-----FUGU5
GibbonGibbonNomascus leucogenys61853Nleu1.0GCA_000146795.1Full genebuildY--
GorillaGorillaGorilla gorilla gorilla9595gorGor3.1GCA_000151905.1Full genebuild---
Guinea PigGuinea PigCavia porcellus10141cavPor3-Full genebuild---
Hamadryas BaboonHamadryas Baboon
(Pre)
Papio hamadryas9557-----Pham
HedgehogHedgehogErinaceus europaeus9365eriEur1-Projection build---
HedgehogHedgehog
(Pre)
Erinaceus europaeus9365-----EriEur2
HorseHorseEquus caballus9796Equ Cab 2GCA_000002305.1Full genebuildY--
HumanHumanHomo sapiens9606GRCh38.p10GCA_000001405.25Full genebuildYY-
HyraxHyraxProcavia capensis9813proCap1-Projection build---
Kangaroo ratKangaroo ratDipodomys ordii10020dipOrd1-Projection build---
LampreyLampreyPetromyzon marinus7757Pmarinus_7.0-Full genebuild---
Lesser hedgehog tenrecLesser hedgehog tenrecEchinops telfairi9371TENREC-Projection build---
MacaqueMacaqueMacaca mulatta9544Mmul_8.0.1GCA_000772875.3Full genebuildYY-
MarmosetMarmosetCallithrix jacchus9483C_jacchus3.2.1GCA_000004665.1Full genebuild---
MedakaMedakaOryzias latipes8090HdrR-Full genebuild---
MegabatMegabatPteropus vampyrus132908pteVam1-Projection build---
MicrobatMicrobatMyotis lucifugus59463Myoluc2.0GCA_000147115.1Full genebuild---
MouseMouseMus musculus10090GRCm38.p5GCA_000001635.7Full genebuildYY-
Mouse LemurMouse LemurMicrocebus murinus30608Mmur_2.0GCA_000165445.2Full genebuild---
Naked mole-ratNaked mole-rat
(Pre)
Heterocephalus glaber10181-----HetGla_female_1.0
Olive baboonOlive baboonPapio anubis9555PapAnu2.0GCA_000264685.1Full genebuild---
OpossumOpossumMonodelphis domestica13616monDom5GCF_000002295.2Full genebuildY--
OrangutanOrangutanPongo abelii9601PPYG2-Projection buildY--
Painted TurtlePainted Turtle
(Pre)
Chrysemys picta bellii8479-----ChrPicBel3.0.1
PandaPandaAiluropoda melanoleuca9646ailMel1GCA_000004335.1Full genebuild---
PigPigSus scrofa9823Sscrofa10.2GCA_000003025.4Full genebuildYY-
Pig FPC_mapPig FPC_map
(Pre)
Sus scrofa map-----MAP
PikaPikaOchotona princeps9978OchPri2.0-Ens-Projection build---
PikaPika
(Pre)
Ochotona princeps9978-----OchPri3
PlatyfishPlatyfishXiphophorus maculatus8083Xipmac4.4.2GCA_000241075.1Full genebuild---
PlatypusPlatypusOrnithorhynchus anatinus9258OANA5GCF_000002275.2Full genebuildYY-
Prairie volePrairie vole
(Pre)
Microtus ochrogaster79684-----MicOch1.0
RabbitRabbitOryctolagus cuniculus9986OryCun2.0GCA_000003625.1Full genebuild-Y-
RatRatRattus norvegicus10116Rnor_6.0GCA_000001895.4Mixed strategy buildYY-
RhinocerosRhinoceros
(Pre)
Ceratotherium simum simum73337-----CerSimSim1
S. cerevisiaeS. cerevisiaeSaccharomyces cerevisiae4932R64-1-1GCA_000146045.2ImportYY-
SheepSheepOvis aries9940Oar_v3.1GCA_000298735.1Mixed strategy buildY--
ShrewShrewSorex araneus42254sorAra1-Projection build---
ShrewShrew
(Pre)
Sorex araneus42254-----SorAra2.0
SlothSlothCholoepus hoffmanni9358choHof1-Projection build---
Sperm whaleSperm whale
(Pre)
Physter macrocephalus9755-----PhyMac_2.0.2
Spotted garSpotted garLepisosteus oculatus7918LepOcu1GCA_000242695.1Full genebuild---
SquirrelSquirrelIctidomys tridecemlineatus43179spetri2GCA_000236235.1Full genebuild---
Squirrel monkeySquirrel monkey
(Pre)
Saimiri boliviensis39432-----SalBol1.0
SticklebackSticklebackGasterosteus aculeatus69293BROAD S1-Full genebuild---
TarsierTarsierTarsius syrichta1868482tarSyr1-Projection build---
Tasmanian devilTasmanian devilSarcophilus harrisii9305Devil_ref v7.0GCA_000189315.1Mixed strategy build---
TetraodonTetraodonTetraodon nigroviridis99883TETRAODON 8.0-Full genebuildY--
TilapiaTilapiaOreochromis niloticus8128Orenil1.0GCA_000188235.1Mixed strategy build---
Tree ShrewTree ShrewTupaia belangeri37347tupBel1-Projection build---
TurkeyTurkeyMeleagris gallopavo9103Turkey_2.01GCA_000146605.1Full genebuildY--
Vervet-AGMVervet-AGMChlorocebus sabaeus60711ChlSab1.1GCA_000409795.2Full genebuild---
WallabyWallabyMacropus eugenii9315Meug_1.0GCA_000004035.1Projection build---
XenopusXenopusXenopus tropicalis8364JGI 4.2GCA_000004195.1Full genebuild-Y-
Zebra FinchZebra FinchTaeniopygia guttata59729taeGut3.2.4-Full genebuildY--
ZebrafishZebrafishDanio rerio7955GRCz10GCA_000002035.3Mixed strategy buildYY-

Credits page for species images

Other Metazoa

Additional metazoan genomes (initially insect vectors and nematodes) are available from EnsemblMetazoa

Plants and Fungi

Plant and fungal genomes can be found at EnsemblPlants and EnsemblFungi

Protists, Bacteria and Archaea

Unicellular eukaryotic and prokaryotic genomes can be found at EnsemblProtists and EnsemblBacteria respectively.