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Ensembl Species

Note: to find out which species were in previous releases, please see the table of assemblies

Common nameScientific nameTaxon IDEnsembl AssemblyAccessionVariation databaseRegulation databasePre assembly
AardvarkAardvark
(Pre)
Orycteropus afer afer1230840----OryAfe1
AlpacaAlpacaVicugna pacos30538vicPac1----
Amazon mollyAmazon mollyPoecilia formosa48698Poecilia_formosa-5.1.2GCA_000485575.1---
Anole lizardAnole lizardAnolis carolinensis28377AnoCar2.0GCA_000090745.1---
ArmadilloArmadilloDasypus novemcinctus9361Dasnov3.0GCA_000208655.2---
BudgerigarBudgerigar
(Pre)
Melopsittacus undulatus13146----MelUnd6.3
BushbabyBushbabyOtolemur garnettii30611OtoGar3GCA_000181295.3---
C.intestinalisC.intestinalisCiona intestinalis7719KHGCA_000224145.1-Y-
C.savignyiC.savignyiCiona savignyi51511CSAV 2.0----
C. elegansC. elegansCaenorhabditis elegans6239WBcel235GCA_000002985.3-Y-
CatCatFelis catus9685Felis_catus_6.2GCA_000181335.2Y--
Cave fishCave fishAstyanax mexicanus7994AstMex102GCA_000372685.1---
ChickenChickenGallus gallus9031Galgal4GCA_000002315.2YY-
ChimpanzeeChimpanzeePan troglodytes9598CHIMP2.1.4GCA_000001515.4YY-
ChimpanzeeChimpanzee
(Pre)
Pan troglodytes9598----Pan_troglodytes_2.1.3
Chinese hamsterChinese hamster
(Pre)
Cricetulus griseus8479----CriGRi_1.0
Chinese softshell turtleChinese softshell turtlePelodiscus sinensis13735PelSin_1.0GCA_000230535.1---
CodCodGadus morhua8049gadMor1----
CoelacanthCoelacanthLatimeria chalumnae7897LatCha1GCA_000225785.1---
CowCowBos taurus9913UMD3.1GCA_000003055.3YY-
Crab eating-macaqueCrab eating-macaque
(Pre)
Macaca fascicularis9541----MacFas_5.0
DogDogCanis lupus familiaris9615CanFam3.1GCA_000002285.2YY-
DolphinDolphinTursiops truncatus9739turTru1----
DolphinDolphin
(Pre)
Tursiops truncatus9739----Ttru14
DuckDuckAnas platyrhynchos8839BGI_duck_1.0GCA_000355885.1---
ElephantElephantLoxodonta africana9785Loxafr3.0GCA_000001905.1---
FerretFerretMustela putorius furo9669MusPutFur1.0GCA_000215625.1---
FlycatcherFlycatcherFicedula albicollis59894FicAlb_1.4GCA_000247815.1---
FruitflyFruitflyDrosophila melanogaster7227BDGP 5GCA_000001215.1YY-
FuguFuguTakifugu rubripes31033FUGU 4.0----
GibbonGibbonNomascus leucogenys61853Nleu1.0GCA_000146795.1Y--
GorillaGorillaGorilla gorilla gorilla9595gorGor3.1GCA_000151905.1---
Guinea PigGuinea PigCavia porcellus10141cavPor3----
Hamadryas BaboonHamadryas Baboon
(Pre)
Papio hamadryas9557----Pham
HedgehogHedgehogErinaceus europaeus9365eriEur1----
HedgehogHedgehog
(Pre)
Erinaceus europaeus9365----EriEur2
HorseHorseEquus caballus9796Equ Cab 2GCA_000002305.1Y--
HumanHumanHomo sapiens9606GRCh38GCA_000001405.15YY-
HyraxHyraxProcavia capensis9813proCap1----
Kangaroo ratKangaroo ratDipodomys ordii10020dipOrd1----
LampreyLampreyPetromyzon marinus7757Pmarinus_7.0----
Lesser hedgehog tenrecLesser hedgehog tenrecEchinops telfairi9371TENREC----
MacaqueMacaqueMacaca mulatta9544MMUL 1.0-YY-
MarmosetMarmosetCallithrix jacchus9483C_jacchus3.2.1GCA_000004665.1---
MedakaMedakaOryzias latipes8090HdrR----
MegabatMegabatPteropus vampyrus132908pteVam1----
MicrobatMicrobatMyotis lucifugus59463Myoluc2.0GCA_000147115.1---
MouseMouseMus musculus10090GRCm38.p3GCA_000001635.5YY-
Mouse LemurMouse LemurMicrocebus murinus30608micMur1----
Naked mole-ratNaked mole-rat
(Pre)
Heterocephalus glaber10181----HetGla_female_1.0
Olive baboonOlive baboonPapio anubis9555PapAnu2.0GCA_000264685.1---
OpossumOpossumMonodelphis domestica13616monDom5GCF_000002295.2Y--
OrangutanOrangutanPongo abelii9601PPYG2GCA_000001545.1Y--
Painted TurtlePainted Turtle
(Pre)
Chrysemys picta bellii8479----ChrPicBel3.0.1
PandaPandaAiluropoda melanoleuca9646ailMel1GCA_000004335.1---
PigPigSus scrofa9823Sscrofa10.2GCA_000003025.4YY-
Pig FPC_mapPig FPC_map
(Pre)
Sus scrofa map----MAP
PikaPikaOchotona princeps9978OchPri2.0----
PikaPika
(Pre)
Ochotona princeps9978----OchPri3
PlatyfishPlatyfishXiphophorus maculatus8083Xipmac4.4.2GCA_000241075.1---
PlatypusPlatypusOrnithorhynchus anatinus9258OANA5GCF_000002275.2YY-
Prairie volePrairie vole
(Pre)
Microtus ochrogaster79684----MicOch1.0
RabbitRabbitOryctolagus cuniculus9986OryCun2.0GCA_000003625.1-Y-
RatRatRattus norvegicus10116Rnor_5.0GCA_000001895.3YY-
RhinocerosRhinoceros
(Pre)
Ceratotherium simum simum73337----CerSimSim1
S. cerevisiaeS. cerevisiaeSaccharomyces cerevisiae4932R64-1-1GCA_000146045.2YY-
SheepSheepOvis aries9940Oar_v3.1GCA_000298735.1Y--
ShrewShrewSorex araneus42254sorAra1----
ShrewShrew
(Pre)
Sorex araneus42254----SorAra2.0
SlothSlothCholoepus hoffmanni9358choHof1----
Spotted garSpotted garLepisosteus oculatus7918LepOcu1GCA_000242695.1---
SquirrelSquirrelIctidomys tridecemlineatus43179spetri2GCA_000236235.1---
Squirrel monkeySquirrel monkey
(Pre)
Saimiri boliviensis39432----SalBol1.0
SticklebackSticklebackGasterosteus aculeatus69293BROAD S1----
TarsierTarsierTarsius syrichta9478tarSyr1----
Tasmanian devilTasmanian devilSarcophilus harrisii9305Devil_ref v7.0GCA_000189315.1---
TetraodonTetraodonTetraodon nigroviridis99883TETRAODON 8.0-Y--
TilapiaTilapiaOreochromis niloticus8128Orenil1.0GCA_000188235.1---
Tree ShrewTree ShrewTupaia belangeri37347tupBel1----
TurkeyTurkeyMeleagris gallopavo9103Turkey_2.01GCA_000146605.1Y--
Vervet-AGMVervet-AGMChlorocebus sabaeus60711ChlSab1.1GCA_000409795.2---
WallabyWallabyMacropus eugenii9315Meug_1.0GCA_000004035.1---
XenopusXenopusXenopus tropicalis8364JGI 4.2GCA_000004195.1-Y-
Zebra FinchZebra FinchTaeniopygia guttata59729taeGut3.2.4-Y--
ZebrafishZebrafishDanio rerio7955Zv9GCA_000002035.2YY-

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Other Metazoa

Additional metazoan genomes (initially insect vectors and nematodes) are available from EnsemblMetazoa

Plants and Fungi

Plant and fungal genomes can be found at EnsemblPlants and EnsemblFungi

Protists, Bacteria and Archaea

Unicellular eukaryotic and prokaryotic genomes can be found at EnsemblProtists and EnsemblBacteria respectively.