Human vs Spotted gar Synteny results
The syntenic regions between Human (Homo sapiens, GRCh38) and Spotted gar (Lepisosteus oculatus, LepOcu1) were extracted from their pairwise alignment in Ensembl release 80. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 580 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Human |
Uncovered: 2,350,273,103 out of 3,099,750,718 |
Uncovered: 27,776,291 out of 38,571,754 |
| Spotted gar |
Uncovered: 624,771,411 out of 945,878,036 |
Uncovered: 20,693,071 out of 31,448,193 |