Description

collagen, type XI, alpha 1 [Source:HGNC Symbol;Acc:2186]

Gene

This transcript is a product of gene ENSG00000060718

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
COL11A1-001ENST000003700967286ENSP000003591141806Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS778YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL11A1-201ENST000003534147174ENSP000003025511767Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS53348YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL11A1-008ENST000005127565442ENSP000004265331690Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS780YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL11A1-202ENST000003583927327ENSP000003511631818Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL11A1-002ENST000004272391709ENSP00000408640570Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
COL11A1-003ENST00000447608776ENSP00000410177200Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
COL11A1-004ENST00000461720678No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL11A1-005ENST00000475980377No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
COL11A1-007ENST00000470170785No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL11A1-006ENST00000465209297No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 65 Coding exons: 65 Transcript length: 5,442 bps Translation length: 1,690 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS780

Ensembl version

ENST00000512756.1

Type

Novel protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000360666 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays