Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCHIP1 ENSSSCG00000011729

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Description

schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]

Location

Primary_assembly 13: 99,067,716-99,633,024 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 4 transcripts (splice variants) and 282 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000080367.2	SCHIP1-203	2241	485aa	ENSSSCP00000067350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R9S5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000041884.3	SCHIP1-201	1828	260aa	ENSSSCP00000046796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AS58 A0A8D0NA87	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000012839.5	SCHIP1-202	1554	244aa	ENSSSCP00000012499.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VGS2 F1SJL8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000070627.2	SCHIP1-204	1354	255aa	ENSSSCP00000072073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VGW3 A0A8D1YSM4	-

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Summary

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