Transcript: ENSSSCT00000080367.2 SCHIP1-203

Description

schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]

Location

Primary_assembly 13: 99,067,716-99,633,022 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 22 domains and features, is associated with 11005 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000011729.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000080367.2	SCHIP1-203	2241	485aa	ENSSSCP00000067350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R9S5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000041884.3	SCHIP1-201	1828	260aa	ENSSSCP00000046796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AS58 A0A8D0NA87	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000012839.5	SCHIP1-202	1554	244aa	ENSSSCP00000012499.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VGS2 F1SJL8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000070627.2	SCHIP1-204	1354	255aa	ENSSSCP00000072073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VGW3 A0A8D1YSM4	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,241 bps, Translation length: 485 residues

Version

ENSSSCT00000080367.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 2.

Transcript: ENSSSCT00000080367.2 SCHIP1-203

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Transcript: ENSSSCT00000080367.2 SCHIP1-203

Summary

About Us

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