Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: Slx4 MGP_PahariEiJ_G0016103

Description

SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:106299]

Location

Chromosome 12: 271,924-295,316 reverse strand.

PAHARI_EIJ_v1.1:LT608305.1

About this gene

This gene has 9 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0027542.1	Slx4-202	5682	1570aa	MGP_PahariEiJ_P0027542	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0027547.1	Slx4-207	871	289aa	MGP_PahariEiJ_P0027547	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027548.1	Slx4-208	728	101aa	MGP_PahariEiJ_P0027548	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027549.1	Slx4-209	694	35aa	MGP_PahariEiJ_P0027549	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027543.1	Slx4-203	4956	78aa	MGP_PahariEiJ_P0027543	Nonsense mediated decay	-
MGP_PahariEiJ_T0027541.1	Slx4-201	4193	104aa	MGP_PahariEiJ_P0027541	Nonsense mediated decay	-
MGP_PahariEiJ_T0027545.1	Slx4-205	2347	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0027544.1	Slx4-204	1881	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0027546.1	Slx4-206	5595	1685aa	MGP_PahariEiJ_P0027546	Unknown likely coding	-

Gene: Slx4 MGP_PahariEiJ_G0016103

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Slx4 MGP_PahariEiJ_G0016103

Summary

About Us

Get help

Our sister sites

Follow us