Transcript: MGP_PahariEiJ_T0027545.1 Slx4-205

Description

SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:106299]

Location

Chromosome 12: 271,946-278,380 reverse strand.

About this transcript

This transcript has 4 exons.

Gene

This transcript is a product of gene MGP_PahariEiJ_G0016103.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0027542.1	Slx4-202	5682	1570aa	MGP_PahariEiJ_P0027542	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0027547.1	Slx4-207	871	289aa	MGP_PahariEiJ_P0027547	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027548.1	Slx4-208	728	101aa	MGP_PahariEiJ_P0027548	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027549.1	Slx4-209	694	35aa	MGP_PahariEiJ_P0027549	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027543.1	Slx4-203	4956	78aa	MGP_PahariEiJ_P0027543	Nonsense mediated decay	-
MGP_PahariEiJ_T0027541.1	Slx4-201	4193	104aa	MGP_PahariEiJ_P0027541	Nonsense mediated decay	-
MGP_PahariEiJ_T0027545.1	Slx4-205	2347	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0027544.1	Slx4-204	1881	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0027546.1	Slx4-206	5595	1685aa	MGP_PahariEiJ_P0027546	Unknown likely coding	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,347 bps,

Version

MGP_PahariEiJ_T0027545.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_PahariEiJ_T0027545.1 Slx4-205

Summary

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Transcript: MGP_PahariEiJ_T0027545.1 Slx4-205

Summary

About Us

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