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Transcript: MGP_FVBNJ_T0079481.1

Description

solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 [Source:MGI Symbol;Acc:MGI:95628]

Gene Synonyms

BGT1, GAT2, Gabt2

Location

Chromosome 6: 117,535,637-117,558,154 forward strand.

Reference strain equivalent

Slc6a12

About this transcript

This transcript has 15 exons, is annotated with 40 domains and features and maps to 173 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0030988.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0079483.1-2644628aaMGP_FVBNJ_P0079483
 
Protein coding
-Ensembl Canonical
MGP_FVBNJ_T0079481.1-1891614aaMGP_FVBNJ_P0079481
 
Protein coding
CCDS39616E9PW98 E9PXG1 E9Q5U8
F6SJH4 F7AYZ6 G5E8Z4
Q8VCS9 		-
MGP_FVBNJ_T0079485.1-1674557aaMGP_FVBNJ_P0079485
 
Protein coding
--
MGP_FVBNJ_T0079482.1-42863aaMGP_FVBNJ_P0079482
 
Protein coding
--
MGP_FVBNJ_T0079488.1-103081aaMGP_FVBNJ_P0079488
 
Nonsense mediated decay
--
MGP_FVBNJ_T0079489.1-883130aaMGP_FVBNJ_P0079489
 
Nonsense mediated decay
--
MGP_FVBNJ_T0079484.1-50065aaMGP_FVBNJ_P0079484
 
Nonsense mediated decay
--
MGP_FVBNJ_T0079490.1-808No protein-
 
Retained intron
--
MGP_FVBNJ_T0079487.1-797No protein-
 
Retained intron
--
MGP_FVBNJ_T0079486.1-790No protein-
 
Retained intron
--

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 1,891 bps, Translation length: 614 residues

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS39616

Version

MGP_FVBNJ_T0079481.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.