Transcript: MGP_FVBNJ_T0079487.1

Description

solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 [Source:MGI Symbol;Acc:MGI:95628]

Gene Synonyms

BGT1, GAT2, Gabt2

Location

Chromosome 6: 117,549,398-117,556,146 forward strand.

Reference strain equivalent

Slc6a12

About this transcript

This transcript has 6 exons and maps to 66 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0030988.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0079483.1	-	2644	628aa	MGP_FVBNJ_P0079483	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0079481.1	-	1891	614aa	MGP_FVBNJ_P0079481	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39616	E9PW98 E9PXG1 E9Q5U8 F6SJH4 F7AYZ6 G5E8Z4 Q8VCS9	-
MGP_FVBNJ_T0079485.1	-	1674	557aa	MGP_FVBNJ_P0079485	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0079482.1	-	428	63aa	MGP_FVBNJ_P0079482	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0079488.1	-	1030	81aa	MGP_FVBNJ_P0079488	Nonsense mediated decay		-	-
MGP_FVBNJ_T0079489.1	-	883	130aa	MGP_FVBNJ_P0079489	Nonsense mediated decay		-	-
MGP_FVBNJ_T0079484.1	-	500	65aa	MGP_FVBNJ_P0079484	Nonsense mediated decay		-	-
MGP_FVBNJ_T0079490.1	-	808	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0079487.1	-	797	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0079486.1	-	790	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 797 bps,

Version

MGP_FVBNJ_T0079487.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0079487.1

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Transcript: MGP_FVBNJ_T0079487.1

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