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Transcript: MGP_CASTEiJ_T0056951.1

Description

synaptosomal-associated protein 23 [Source:MGI Symbol;Acc:MGI:109356]

Gene Synonyms

23kDa, AA408749, SNAP-23, Sndt, Syndet

Location

Chromosome 2: 122,477,952-122,516,408 forward strand.

Reference strain equivalent

Snap23

About this transcript

This transcript has 8 exons, is annotated with 18 domains and features and maps to 365 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0025551.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_CASTEiJ_T0056953.1-2757221aaMGP_CASTEiJ_P0056953
 
Protein coding
-Ensembl Canonical
MGP_CASTEiJ_T0056951.1-2750210aaMGP_CASTEiJ_P0056951
 
Protein coding
CCDS16622, CCDS50681A2AKH4 B0R029 B0R030
E9Q8A1 O09044 Q9D3L3
-
MGP_CASTEiJ_T0056952.1-2685210aaMGP_CASTEiJ_P0056952
 
Protein coding
--
MGP_CASTEiJ_T0056957.1-747161aaMGP_CASTEiJ_P0056957
 
Protein coding
--
MGP_CASTEiJ_T0056956.1-48185aaMGP_CASTEiJ_P0056956
 
Protein coding
--
MGP_CASTEiJ_T0056954.1-79198aaMGP_CASTEiJ_P0056954
 
Nonsense mediated decay
--
MGP_CASTEiJ_T0056959.1-405No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0056955.1-791No protein-
 
Retained intron
--
MGP_CASTEiJ_T0056958.1-753No protein-
 
Retained intron
--

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,750 bps, Translation length: 210 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O09044

CCDS

This transcript is a member of the Mouse CAST/EiJ CCDS set: CCDS16622, CCDS50681

Version

MGP_CASTEiJ_T0056951.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.