Transcript: MGP_CASTEiJ_T0056958.1

Description

synaptosomal-associated protein 23 [Source:MGI Symbol;Acc:MGI:109356]

Gene Synonyms

23kDa, AA408749, SNAP-23, Sndt, Syndet

Location

Chromosome 2: 122,497,605-122,507,136 forward strand.

Reference strain equivalent

Snap23

About this transcript

This transcript has 3 exons and maps to 50 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0025551.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0056953.1	-	2757	221aa	MGP_CASTEiJ_P0056953	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0056951.1	-	2750	210aa	MGP_CASTEiJ_P0056951	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16622, CCDS50681	A2AKH4 B0R029 B0R030 E9Q8A1 O09044 Q9D3L3	-
MGP_CASTEiJ_T0056952.1	-	2685	210aa	MGP_CASTEiJ_P0056952	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0056957.1	-	747	161aa	MGP_CASTEiJ_P0056957	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0056956.1	-	481	85aa	MGP_CASTEiJ_P0056956	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0056954.1	-	791	98aa	MGP_CASTEiJ_P0056954	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0056959.1	-	405	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0056955.1	-	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0056958.1	-	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 753 bps,

Version

MGP_CASTEiJ_T0056958.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_CASTEiJ_T0056958.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_CASTEiJ_T0056958.1

Summary

About Us

Get help

Our sister sites

Follow us