Mouse CAST/EiJ (CAST_EiJ_v1)
Description

collagen, type XVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:88451]

Gene Synonyms

endostatin

Location
Reference strain equivalent
About this transcript

This transcript has 42 exons, is annotated with 45 domains and features and maps to 434 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_CASTEiJ_T0025191.1-63331773aaMGP_CASTEiJ_P0025191
 
Protein coding
-Ensembl Canonical
MGP_CASTEiJ_T0025190.1-50581314aaMGP_CASTEiJ_P0025190
 
Protein coding
CCDS23953, CCDS48604D3Z556 D3Z5C2 E9QPX1
P39061
-
MGP_CASTEiJ_T0025192.1-47881526aaMGP_CASTEiJ_P0025192
 
Protein coding
--
MGP_CASTEiJ_T0025194.1-1956562aaMGP_CASTEiJ_P0025194
 
Protein coding
--
MGP_CASTEiJ_T0025193.1-715160aaMGP_CASTEiJ_P0025193
 
Protein coding
--
Statistics

Exons: 42, Coding exons: 42, Transcript length: 5,058 bps, Translation length: 1,314 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P39061

CCDS

This transcript is a member of the Mouse CAST/EiJ CCDS set: CCDS23953, CCDS48604

Version

MGP_CASTEiJ_T0025190.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.