Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Col18a1 MGP_CASTEiJ_G0016724

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Description

collagen, type XVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:88451]

Gene Synonyms

endostatin

Location

Chromosome 10: 77,079,135-77,198,801 reverse strand.

CAST_EiJ_v1:CM004003.1

Reference strain equivalent

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0025191.1	-	6333	1773aa	MGP_CASTEiJ_P0025191	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0025190.1	-	5058	1314aa	MGP_CASTEiJ_P0025190	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23953, CCDS48604	D3Z556 D3Z5C2 E9QPX1 P39061	-
MGP_CASTEiJ_T0025192.1	-	4788	1526aa	MGP_CASTEiJ_P0025192	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0025194.1	-	1956	562aa	MGP_CASTEiJ_P0025194	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0025193.1	-	715	160aa	MGP_CASTEiJ_P0025193	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-

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Summary

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