Mouse (GRCm39)
Description

lysine (K)-specific demethylase 5D [Source:MGI Symbol;Acc:MGI:99780]

Gene Synonyms

HY, Jarid1d, Smcy

Location
About this transcript

This transcript has 22 exons, is associated with 1448 variant alleles and maps to 277 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000055032.14Kdm5d-20179741548aaENSMUSP00000061095.8
 
Protein coding
CCDS30541Q62240 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000189069.7Kdm5d-2072177476aaENSMUSP00000139636.2
 
Protein coding
Q8BQM3 GENCODE basicTSL:1
ENSMUST00000186726.7Kdm5d-2045916271aaENSMUSP00000140462.2
 
Nonsense mediated decay
A0A087WR43 TSL:1
ENSMUST00000186696.7Kdm5d-2033708691aaENSMUSP00000140663.2
 
Nonsense mediated decay
Q62240-4 TSL:5
ENSMUST00000188910.7Kdm5d-2064354No protein-
 
Retained intron
-TSL:1
ENSMUST00000187296.2Kdm5d-2054037No protein-
 
Retained intron
-TSL:1
ENSMUST00000189955.2Kdm5d-2092770No protein-
 
Retained intron
-TSL:NA
ENSMUST00000189626.7Kdm5d-2081821No protein-
 
Retained intron
-TSL:1
ENSMUST00000185542.2Kdm5d-202696No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 22, Coding exons: 15, Transcript length: 3,708 bps, Translation length: 691 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62240

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000186696.7

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.