Description

lysine (K)-specific demethylase 5D [Source:MGI Symbol;Acc:MGI:99780]

Location
About this transcript

This transcript has 26 exons, is annotated with 36 domains and features, is associated with 4 variations and maps to 48 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Kdm5d-001ENSMUST0000005503279741548aaENSMUSP00000061095
 
Protein coding
CCDS30541Q62240 NM_011419
NP_035549
TSL:1GENCODE basicAPPRIS P1
Kdm5d-004ENSMUST000001890692177476aaENSMUSP00000139636
 
Protein coding
-Q8BQM3 -TSL:1GENCODE basic
Kdm5d-002ENSMUST000001867265916271aaENSMUSP00000140462
 
Nonsense mediated decay
-A0A087WR43 -TSL:1
Kdm5d-003ENSMUST000001866963708691aaENSMUSP00000140663
 
Nonsense mediated decay
-Q62240 -TSL:5
Kdm5d-005ENSMUST000001889104354No protein-
 
Retained intron
---TSL:1
Kdm5d-008ENSMUST000001872964037No protein-
 
Retained intron
---TSL:1
Kdm5d-009ENSMUST000001899552770No protein-
 
Retained intron
---TSL:NA
Kdm5d-006ENSMUST000001896261821No protein-
 
Retained intron
---TSL:1
Kdm5d-007ENSMUST00000185542696No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 26 Coding exons: 26 Transcript length: 7,974 bps Translation length: 1,548 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS30541

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62240

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENSMUST00000055032.11

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays