Description

calpain 5 [Source:MGI Symbol;Acc:MGI:1100859]

Location
Gene

This transcript is a product of gene ENSMUSG00000035547

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
Capn5-001ENSMUST000000409714498ENSMUSP00000048183640Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS21465YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Capn5-002ENSMUST000001071122232ENSMUSP00000102729640Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS21465YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Capn5-003ENSMUST00000129430440ENSMUSP0000012120027Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
Capn5-004ENSMUST00000155056382ENSMUSP0000011669746Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
Capn5-005ENSMUST00000134638668No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Statistics

Exons: 13 Coding exons: 12 Transcript length: 4,498 bps Translation length: 640 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21465

Ensembl version

ENSMUST00000040971.7

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTMUST00000053964 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays