Description

calpain 5 [Source:MGI Symbol;Acc:MGI:1100859]

Location
Gene

This transcript is a product of gene ENSMUSG00000035547

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Capn5-001ENSMUST000000409714498 bp640 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21465D3YU84 O08688 Q3TPL4
Q3UTF3
NM_007602
NP_031628
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Capn5-002ENSMUST000001071122232 bp640 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21465D3YU84 O08688 Q3TPL4
Q3UTF3
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Capn5-003ENSMUST00000129430440 bp27 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YU84 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Capn5-004ENSMUST00000155056382 bp46 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YU84 D3Z432 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Capn5-005ENSMUST00000134638668 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Statistics

Exons: 13 Coding exons: 12 Transcript length: 2,232 bps Translation length: 640 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21465

Uniprot

This transcript corresponds to the following Uniprot identifiers: O08688

Ensembl version

ENSMUST00000107112.1

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays