Description

syntaxin 4A (placental) [Source:MGI Symbol;Acc:MGI:893577]

Gene

This transcript is a product of gene ENSMUSG00000030805

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Stx4a-001ENSMUST000000330751456 bp298 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21880P70452 NM_009294
NP_033320
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Stx4a-002ENSMUST000001217051335 bp298 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21880P70452 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Stx4a-004ENSMUST00000156537778 bp47 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RJ29 -
Stx4a-003ENSMUST00000152310897 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Stx4a-005ENSMUST00000138399749 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Stx4a-007ENSMUST00000123180742 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Stx4a-008ENSMUST00000142849659 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Stx4a-009ENSMUST00000125861546 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Stx4a-006ENSMUST00000138294501 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 11 Coding exons: 10 Transcript length: 1,456 bps Translation length: 298 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21880

Uniprot

This transcript corresponds to the following Uniprot identifiers: P70452

Ensembl version

ENSMUST00000033075.8

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays