Description

syntaxin 4A (placental) [Source:MGI Symbol;Acc:MGI:893577]

Gene

This transcript is a product of gene ENSMUSG00000030805

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCCDSGENCODE basic
Stx4a-001ENSMUST000000330751456ENSMUSP00000033075298Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS21880YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Stx4a-002ENSMUST000001217051335ENSMUSP00000112927298Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS21880YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Stx4a-004ENSMUST00000156537778ENSMUSP0000011803447Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
Stx4a-003ENSMUST00000152310897No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Stx4a-005ENSMUST00000138399749No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Stx4a-007ENSMUST00000123180742No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Stx4a-008ENSMUST00000142849659No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Stx4a-009ENSMUST00000125861546No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Stx4a-006ENSMUST00000138294501No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Statistics

Exons: 11 Coding exons: 10 Transcript length: 1,456 bps Translation length: 298 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21880

Ensembl version

ENSMUST00000033075.7

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTMUST00000076681 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays