Description

syntaxin 4A (placental) [Source:MGI Symbol;Acc:MGI:893577]

Gene

This transcript is a product of gene ENSMUSG00000030805

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCCDSGENCODE basic
Stx4a-001ENSMUST000000330751456ENSMUSP00000033075298Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS21880YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Stx4a-002ENSMUST000001217051335ENSMUSP00000112927298Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS21880YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Stx4a-004ENSMUST00000156537778ENSMUSP0000011803447Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
Stx4a-003ENSMUST00000152310897No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Stx4a-005ENSMUST00000138399749No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Stx4a-007ENSMUST00000123180742No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Stx4a-008ENSMUST00000142849659No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Stx4a-009ENSMUST00000125861546No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Stx4a-006ENSMUST00000138294501No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Statistics

Exons: 10 Coding exons: 10 Transcript length: 1,335 bps Translation length: 298 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21880

Ensembl version

ENSMUST00000121705.1

Type

Known protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTMUST00000076682 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays