Transcript: ENSDART00000153227.2 nfe2l1b-203

Description

nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]

Gene Synonyms

Nrf1b, zmp:0000000800

Location

Chromosome 12: 28,854,963-28,855,769 forward strand.

About this transcript

This transcript has 2 exons, is associated with 128 variant alleles and maps to 22 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000076533.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152969.2	nfe2l1b-201	643	214aa	ENSDARP00000127352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000152991.3	nfe2l1b-202	5275	721aa	ENSDARP00000127336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAR7	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000153227.2	nfe2l1b-203	502	16aa	ENSDARP00000127206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAE0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 502 bps, Translation length: 16 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000153227.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153227.2 nfe2l1b-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000153227.2 nfe2l1b-203

Summary

About Us

Get help

Our sister sites

Follow us