Transcript: ENSDART00000152969.2 nfe2l1b-201

Description

nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]

Gene Synonyms

Nrf1b, zmp:0000000800

Location

Chromosome 12: 28,856,151-28,862,155 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 171 variant alleles and maps to 64 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000076533.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152969.2	nfe2l1b-201	643	214aa	ENSDARP00000127352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000152991.3	nfe2l1b-202	5275	721aa	ENSDARP00000127336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAR7	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000153227.2	nfe2l1b-203	502	16aa	ENSDARP00000127206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAE0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 643 bps, Translation length: 214 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000152969.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000152969.2 nfe2l1b-201

Summary

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Transcript: ENSDART00000152969.2 nfe2l1b-201

Summary

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