Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:rp71-1h20.5 ENSDARG00000098176

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Description

si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]

Gene Synonyms

fj37h12, wu:fj37h12, zgc:113122

Location

Chromosome 21: 2,103,164-2,130,241 reverse strand.

GRCz11:CM002905.2

About this gene

This gene has 3 transcripts (splice variants), 5 orthologues and 290 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166003.2	si:rp71-1h20.5-202	1600	367aa	ENSDARP00000130134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BLB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163781.2	si:rp71-1h20.5-201	1055	167aa	ENSDARP00000131718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ41	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167648.2	si:rp71-1h20.5-203	873	167aa	ENSDARP00000130952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ41	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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