Transcript: ENSDART00000166003.2 si:rp71-1h20.5-202

Description

si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]

Gene Synonyms

fj37h12, wu:fj37h12, zgc:113122

Location

About this transcript

This transcript has 3 exons, is annotated with 66 domains and features, is associated with 213 variant alleles and maps to 208 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166003.2	si:rp71-1h20.5-202	1600	367aa	ENSDARP00000130134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BLB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163781.2	si:rp71-1h20.5-201	1055	167aa	ENSDARP00000131718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ41	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167648.2	si:rp71-1h20.5-203	873	167aa	ENSDARP00000130952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ41	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,600 bps, Translation length: 367 residues

Version

ENSDART00000166003.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.