Gene: syngap1b ENSDARG00000069765

Description

synaptic Ras GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-100921-2]

Gene Synonyms

si:dkey-246f6.1, syngap1

Location

GRCz11:CM002900.2

About this gene

This gene has 2 transcripts (splice variants), 204 orthologues, 14 paralogues and is associated with 22 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000093365.7	syngap1b-201	7229	1507aa	ENSDARP00000087797.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F1U4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000143867.3	syngap1b-202	7300	1246aa	ENSDARP00000122011.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHX3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary