Transcript: ENSDART00000093365.7 syngap1b-201

Description

synaptic Ras GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-100921-2]

Gene Synonyms

si:dkey-246f6.1, syngap1

Location

About this transcript

This transcript has 21 exons, is annotated with 41 domains and features, is associated with 2672 variant alleles and maps to 158 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000093365.7	syngap1b-201	7229	1507aa	ENSDARP00000087797.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F1U4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000143867.3	syngap1b-202	7300	1246aa	ENSDARP00000122011.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHX3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 7,229 bps, Translation length: 1,507 residues

Version

ENSDART00000093365.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.