Transcript: F35B3.5e.1

Description

Patronin (microtubule-binding protein) homolog [Source:NCBI gene;Acc:181743]

Location

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features and maps to 42 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
F35B3.5a.1	-	3800	1110aa	F35B3.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PAZ9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
F35B3.5c.1	-	3788	1112aa	F35B3.5c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PAZ9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
F35B3.5e.1	-	1794	597aa	F35B3.5e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PAZ9	-
F35B3.5d.1	-	1161	386aa	F35B3.5d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PAZ9	-
F35B3.5b	-	2693	No protein	-	A non-coding gene.ncRNA	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,794 bps, Translation length: 597 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: U4PAZ9

Version

F35B3.5e.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase