Transcript: F35B3.5b

Description

Patronin (microtubule-binding protein) homolog [Source:NCBI gene;Acc:181743]

Location

About this transcript

This transcript has 20 exons and maps to 50 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
F35B3.5a.1	-	3800	1110aa	F35B3.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PAZ9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
F35B3.5c.1	-	3788	1112aa	F35B3.5c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PAZ9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
F35B3.5e.1	-	1794	597aa	F35B3.5e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PAZ9	-
F35B3.5d.1	-	1161	386aa	F35B3.5d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PAZ9	-
F35B3.5b	-	2693	No protein	-	A non-coding gene.ncRNA	-	-

Summary

Statistics

Exons: 20, Coding exons: 0, Transcript length: 2,693 bps,

Version

F35B3.5b

Type

NcRNA

Annotation Method

Protein-coding model imported from WormBase