Summary
- Splice variants
- Transcript comparison
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Sequence
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Comparative Genomics
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Gene: Fam186a ENSMUSG00000045350

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Description

family with sequence similarity 186, member A [Source:MGI Symbol;Acc:MGI:2685766]

Gene Synonyms

1700030F18Rik, LOC380973

Location

Chromosome 15: 99,816,229-99,864,942 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 2 transcripts (splice variants) and 44 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000100209.6	Fam186a-202	9320	3035aa	ENSMUSP00000097783.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K3W4Q5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000062631.15	Fam186a-201	759	104aa	ENSMUSP00000053434.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37207	Q9D9R9-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data