Transcript: ENSMUST00000062631.15 Fam186a-201

Description

family with sequence similarity 186, member A [Source:MGI Symbol;Acc:MGI:2685766]

Gene Synonyms

1700030F18Rik, LOC380973

Location

Chromosome 15: 99,816,229-99,829,677 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 1244 variant alleles and maps to 139 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000045350.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000100209.6	Fam186a-202	9320	3035aa	ENSMUSP00000097783.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K3W4Q5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000062631.15	Fam186a-201	759	104aa	ENSMUSP00000053434.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37207	Q9D9R9-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 759 bps, Translation length: 104 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D9R9

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37207

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000062631.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000062631.15 Fam186a-201

Summary

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Transcript: ENSMUST00000062631.15 Fam186a-201

Summary

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