Transcript: MGP_WSBEiJ_T0038965.1

Description

homeobox containing 1 [Source:MGI Symbol;Acc:MGI:2445066]

Gene Synonyms

AI451877, AI604847, F830020C16Rik

Location

Chromosome 14: 59,545,112-59,685,523 reverse strand.

Reference strain equivalent

Hmbox1

About this transcript

This transcript has 11 exons, is annotated with 24 domains and features and maps to 315 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0020786.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0038970.1	-	1729	444aa	MGP_WSBEiJ_P0038970	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0038965.1	-	3397	404aa	MGP_WSBEiJ_P0038965	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36955	H3BJ31 H3BK13 H3BK67 H3BKF8 H3BKM3 H3BL55 Q8BJA3	-
MGP_WSBEiJ_T0038968.1	-	2958	420aa	MGP_WSBEiJ_P0038968	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038967.1	-	2931	419aa	MGP_WSBEiJ_P0038967	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038971.1	-	1771	405aa	MGP_WSBEiJ_P0038971	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038973.1	-	1714	417aa	MGP_WSBEiJ_P0038973	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038969.1	-	1586	408aa	MGP_WSBEiJ_P0038969	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038972.1	-	1422	364aa	MGP_WSBEiJ_P0038972	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038966.1	-	616	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0038974.1	-	4740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 3,397 bps, Translation length: 404 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BJA3

CCDS

This transcript is a member of the Mouse WSB/EiJ CCDS set: CCDS36955

Version

MGP_WSBEiJ_T0038965.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0038965.1

Summary

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Transcript: MGP_WSBEiJ_T0038965.1

Summary

About Us

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