Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Gene history

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Gene: Hmbox1 MGP_WSBEiJ_G0020786

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Description

homeobox containing 1 [Source:MGI Symbol;Acc:MGI:2445066]

Gene Synonyms

AI451877, AI604847, F830020C16Rik

Location

Chromosome 14: 59,545,112-59,685,544 reverse strand.

WSB_EiJ_v1:CM004067.1

Reference strain equivalent

About this gene

This gene has 10 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0038970.1	-	1729	444aa	MGP_WSBEiJ_P0038970	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0038965.1	-	3397	404aa	MGP_WSBEiJ_P0038965	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36955	H3BJ31 H3BK13 H3BK67 H3BKF8 H3BKM3 H3BL55 Q8BJA3	-
MGP_WSBEiJ_T0038968.1	-	2958	420aa	MGP_WSBEiJ_P0038968	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038967.1	-	2931	419aa	MGP_WSBEiJ_P0038967	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038971.1	-	1771	405aa	MGP_WSBEiJ_P0038971	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038973.1	-	1714	417aa	MGP_WSBEiJ_P0038973	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038969.1	-	1586	408aa	MGP_WSBEiJ_P0038969	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038972.1	-	1422	364aa	MGP_WSBEiJ_P0038972	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0038966.1	-	616	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0038974.1	-	4740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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