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Transcript: MGP_C57BL6NJ_T0085321.1

Description

transmembrane 6 superfamily member 1 [Source:MGI Symbol;Acc:MGI:1933209]

Gene Synonyms

AI428514, BC023123, C630016D09Rik

Location

Chromosome 7: 87,226,432-87,251,501 forward strand.

Reference strain equivalent

Tm6sf1

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features and maps to 250 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0032920.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0085321.1-2226370aaMGP_C57BL6NJ_P0085321
 
Protein coding
CCDS21408, CCDS80744D3YX52 D6RD09 P58749
Ensembl Canonical
MGP_C57BL6NJ_T0085326.1-1066279aaMGP_C57BL6NJ_P0085326
 
Protein coding
--
MGP_C57BL6NJ_T0085324.1-2251161aaMGP_C57BL6NJ_P0085324
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0085323.1-679No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0085322.1-3419No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0085327.1-2094No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0085328.1-750No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0085325.1-984327aaMGP_C57BL6NJ_P0085325
 
Unknown likely coding
--

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,226 bps, Translation length: 370 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P58749

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS21408, CCDS80744

Version

MGP_C57BL6NJ_T0085321.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.