Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: Tm6sf1 MGP_C57BL6NJ_G0032920

Description

transmembrane 6 superfamily member 1 [Source:MGI Symbol;Acc:MGI:1933209]

Gene Synonyms

AI428514, BC023123, C630016D09Rik

Location

C57BL_6NJ_v1:CM004221.1

Reference strain equivalent

About this gene

This gene has 8 transcripts (splice variants).

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0085321.1	-	2226	370aa	MGP_C57BL6NJ_P0085321	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21408, CCDS80744	D3YX52 D6RD09 P58749	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0085326.1	-	1066	279aa	MGP_C57BL6NJ_P0085326	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0085324.1	-	2251	161aa	MGP_C57BL6NJ_P0085324	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0085323.1	-	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0085322.1	-	3419	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0085327.1	-	2094	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0085328.1	-	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0085325.1	-	984	327aa	MGP_C57BL6NJ_P0085325	Unknown likely coding		-	-

Summary