Ensembl mirror
More ▼
Search »
Mouse C57BL/6NJ (C57BL_6NJ_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_C57BL6NJ_T0037817.1

Description

patched 1 [Source:MGI Symbol;Acc:MGI:105373]

Gene Synonyms

A230106A15Rik, PTCHGN, Patched 1, Ptc, Ptc1, Ptch, mes, patched c isoform, patched eGN isoform

Location

Chromosome 13: 65,546,551-65,603,460 reverse strand.

Reference strain equivalent

Ptch1

About this transcript

This transcript has 24 exons, is annotated with 41 domains and features and maps to 413 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0021058.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0037817.1-70911434aaMGP_C57BL6NJ_P0037817
 
Protein coding
CCDS26592A0A0A6YVW7 A0A0A6YVX7 A0A0A6YWC4
A0A0A6YWZ4 Q5R1U4 Q61115
Ensembl Canonical
MGP_C57BL6NJ_T0037823.1-1123326aaMGP_C57BL6NJ_P0037823
 
Protein coding
--
MGP_C57BL6NJ_T0037821.1-849174aaMGP_C57BL6NJ_P0037821
 
Protein coding
--
MGP_C57BL6NJ_T0037822.1-809174aaMGP_C57BL6NJ_P0037822
 
Protein coding
--
MGP_C57BL6NJ_T0037818.1-7654581aaMGP_C57BL6NJ_P0037818
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0037820.1-3418426aaMGP_C57BL6NJ_P0037820
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0037819.1-305No protein-
 
Retained intron
--

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 7,091 bps, Translation length: 1,434 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q61115

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS26592

Version

MGP_C57BL6NJ_T0037817.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.