Ensembl mirror
More ▼
Search »
Mouse C3H/HeJ (C3H_HeJ_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_C3HHeJ_T0085892.1

Description

partner and localizer of BRCA2 [Source:MGI Symbol;Acc:MGI:3040695]

Gene Synonyms

BC066140

Location

Chromosome 7: 125,954,440-125,981,139 reverse strand.

Reference strain equivalent

Palb2

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features and maps to 178 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0032649.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C3HHeJ_T0085893.1-37501104aaMGP_C3HHeJ_P0085893
 
Protein coding
-Ensembl Canonical
MGP_C3HHeJ_T0085897.1-33041030aaMGP_C3HHeJ_P0085897
 
Protein coding
--
MGP_C3HHeJ_T0085894.1-2559741aaMGP_C3HHeJ_P0085894
 
Protein coding
--
MGP_C3HHeJ_T0085892.1-1553384aaMGP_C3HHeJ_P0085892
 
Protein coding
CCDS40117, CCDS72035, CCDS80796, CCDS80797D3YVU6 D6RDD1 F6VTV6
Q3U0P1 		-
MGP_C3HHeJ_T0085898.1-318138aaMGP_C3HHeJ_P0085898
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0085896.1-135018aaMGP_C3HHeJ_P0085896
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0085899.1-3216No protein-
 
Retained intron
--
MGP_C3HHeJ_T0085900.1-2145No protein-
 
Retained intron
--
MGP_C3HHeJ_T0085895.1-709No protein-
 
Retained intron
--

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,553 bps, Translation length: 384 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3U0P1

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS40117, CCDS72035, CCDS80796, CCDS80797

Version

MGP_C3HHeJ_T0085892.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.