Transcript: MGP_C3HHeJ_T0085899.1

Description

partner and localizer of BRCA2 [Source:MGI Symbol;Acc:MGI:3040695]

Gene Synonyms

BC066140

Location

Chromosome 7: 125,973,812-125,981,149 reverse strand.

Reference strain equivalent

Palb2

About this transcript

This transcript has 4 exons and maps to 185 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0032649.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C3HHeJ_T0085893.1	-	3750	1104aa	MGP_C3HHeJ_P0085893	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C3HHeJ_T0085897.1	-	3304	1030aa	MGP_C3HHeJ_P0085897	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0085894.1	-	2559	741aa	MGP_C3HHeJ_P0085894	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0085892.1	-	1553	384aa	MGP_C3HHeJ_P0085892	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40117, CCDS72035, CCDS80796, CCDS80797	D3YVU6 D6RDD1 F6VTV6 Q3U0P1	-
MGP_C3HHeJ_T0085898.1	-	3181	38aa	MGP_C3HHeJ_P0085898	Nonsense mediated decay		-	-
MGP_C3HHeJ_T0085896.1	-	1350	18aa	MGP_C3HHeJ_P0085896	Nonsense mediated decay		-	-
MGP_C3HHeJ_T0085899.1	-	3216	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C3HHeJ_T0085900.1	-	2145	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C3HHeJ_T0085895.1	-	709	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,216 bps,

Version

MGP_C3HHeJ_T0085899.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C3HHeJ_T0085899.1

Summary

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Transcript: MGP_C3HHeJ_T0085899.1

Summary

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