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Transcript: MGP_BALBcJ_T0068679.1

Description

lysine (K)-specific demethylase 1A [Source:MGI Symbol;Acc:MGI:1196256]

Gene Synonyms

1810043O07Rik, AA408884, Aof2, D4Ertd478e, Kdm1, Kiaa0601, LSD1, Lsd1, mKIAA0601

Location

Chromosome 4: 133,857,254-133,909,780 reverse strand.

Reference strain equivalent

Kdm1a

About this transcript

This transcript has 19 exons, is annotated with 25 domains and features and maps to 274 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0028952.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0068680.1-3030873aaMGP_BALBcJ_P0068680
 
Protein coding
-Ensembl Canonical
MGP_BALBcJ_T0068679.1-3010853aaMGP_BALBcJ_P0068679
 
Protein coding
CCDS51331A3KG93 F6Z4I3 F6ZC60
G8JL40 Q6ZQ88 		-
MGP_BALBcJ_T0068681.1-2051682aaMGP_BALBcJ_P0068681
 
Protein coding
--
MGP_BALBcJ_T0068687.1-965321aaMGP_BALBcJ_P0068687
 
Protein coding
--
MGP_BALBcJ_T0068686.1-751249aaMGP_BALBcJ_P0068686
 
Protein coding
--
MGP_BALBcJ_T0068684.1-1130No protein-
 
Retained intron
--
MGP_BALBcJ_T0068685.1-995No protein-
 
Retained intron
--
MGP_BALBcJ_T0068683.1-858No protein-
 
Retained intron
--
MGP_BALBcJ_T0068682.1-825No protein-
 
Retained intron
--

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,010 bps, Translation length: 853 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZQ88

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS51331

Version

MGP_BALBcJ_T0068679.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.