Transcript: MGP_BALBcJ_T0068686.1

Description

lysine (K)-specific demethylase 1A [Source:MGI Symbol;Acc:MGI:1196256]

Gene Synonyms

1810043O07Rik, AA408884, Aof2, D4Ertd478e, Kdm1, Kiaa0601, LSD1, Lsd1, mKIAA0601

Location

Chromosome 4: 133,861,957-133,875,125 reverse strand.

Reference strain equivalent

Kdm1a

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features and maps to 62 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0028952.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0068680.1	-	3030	873aa	MGP_BALBcJ_P0068680	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0068679.1	-	3010	853aa	MGP_BALBcJ_P0068679	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51331	A3KG93 F6Z4I3 F6ZC60 G8JL40 Q6ZQ88	-
MGP_BALBcJ_T0068681.1	-	2051	682aa	MGP_BALBcJ_P0068681	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0068687.1	-	965	321aa	MGP_BALBcJ_P0068687	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0068686.1	-	751	249aa	MGP_BALBcJ_P0068686	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0068684.1	-	1130	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0068685.1	-	995	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0068683.1	-	858	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0068682.1	-	825	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 751 bps, Translation length: 249 residues

Version

MGP_BALBcJ_T0068686.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0068686.1

Summary

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Transcript: MGP_BALBcJ_T0068686.1

Summary

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