Human (GRCh38.p14)
Description

MEFV innate immunity regulator, pyrin [Source:HGNC Symbol;Acc:HGNC:6998]

Gene Synonyms

FMF, MEF, TRIM20

Location
About this transcript

This transcript has 9 exons, is annotated with 16 domains and features, is associated with 8633 variant alleles and maps to 308 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000219596.6MEFV-2013506781aaENSP00000219596.1
 
Protein coding
CCDS10498O15553-2 NM_000243.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000339854.8MEFV-2022959601aaENSP00000339639.4
 
Protein coding
F8W6Z2 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000541159.5MEFV-2091888445aaENSP00000438711.1
 
Protein coding
CCDS55981O15553-3 -GENCODE basicTSL:1
ENST00000536379.5MEFV-2031713570aaENSP00000445079.1
 
Protein coding
O15553-1 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000542898.5MEFV-2103710644aaENSP00000444615.1
 
Nonsense mediated decay
F5H595 -TSL:5
ENST00000537682.5MEFV-2053617613aaENSP00000438611.1
 
Nonsense mediated decay
F5H2E5 -TSL:5
ENST00000538326.5MEFV-2063597490aaENSP00000437486.1
 
Nonsense mediated decay
F5H6N9 -TSL:5
ENST00000536980.5MEFV-2042984402aaENSP00000444178.1
 
Nonsense mediated decay
F5GZV9 -TSL:5
ENST00000570511.5MEFV-2111751306aaENSP00000458312.1
 
Nonsense mediated decay
I3L0S7 -TSL:1
ENST00000539145.5MEFV-207126795aaENSP00000444471.1
 
Nonsense mediated decay
D2DTW1 -TSL:1
ENST00000576315.5MEFV-214115195aaENSP00000460551.1
 
Nonsense mediated decay
D2DTW1 -TSL:1
ENST00000574583.5MEFV-213111895aaENSP00000460269.1
 
Nonsense mediated decay
D2DTW1 -TSL:1
ENST00000572244.5MEFV-2121036101aaENSP00000461186.1
 
Nonsense mediated decay
E3P8H6 -TSL:1
ENST00000697124.1MEFV-2151793No protein-
 
Retained intron
---
ENST00000539154.1MEFV-2081090No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,888 bps, Translation length: 445 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15553

CCDS

This transcript is a member of the Human CCDS set: CCDS55981

Transcript Support Level (TSL)

TSL:1

Version

ENST00000541159.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.