Description

Mediterranean fever [Source:HGNC Symbol;Acc:HGNC:6998]

Synonyms

FMF, MEF, TRIM20

Location
Gene

This transcript is a product of gene ENSG00000103313

This gene has 15 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
MEFV-001ENST000002195963499 bp781 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10498O15553 NM_000243
NP_000234
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MEFV-002ENST000005411591888 bp445 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55981I4DSV7 O15553 NM_001198536
NP_001185465
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MEFV-010ENST000003398542959 bp601 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8W6Z2 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MEFV-201ENST000006216551883 bp411 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I4DSV7 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MEFV-004ENST000005363791713 bp570 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I4DSV7 O15553 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MEFV-008ENST000005428983710 bp644 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5H595 -
MEFV-006ENST000005376823617 bp613 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5H2E5 -
MEFV-007ENST000005383263597 bp490 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5H6N9 -
MEFV-009ENST000005369802984 bp402 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5GZV9 I4DSV7 -
MEFV-015ENST000005705111751 bp306 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-I3L0S7 -
MEFV-003ENST000005391451267 bp95 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D2DTW1 -
MEFV-013ENST000005763151151 bp95 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D2DTW1 -
MEFV-014ENST000005745831118 bp95 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D2DTW1 -
MEFV-012ENST000005722441036 bp101 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E3P8H6 -
MEFV-005ENST000005391541090 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 6 Coding exons: 3 Transcript length: 1,036 bps Translation length: 101 residues

Ensembl version

ENST00000572244.2

Type

Known nonsense mediated decay

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays