Transcript: ENSDART00000142600.2 si:ch211-121a2.2-203

Description

si:ch211-121a2.2 [Source:ZFIN;Acc:ZDB-GENE-070705-21]

Location

About this transcript

This transcript has 3 exons, is associated with 271 variant alleles and maps to 70 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023677.10	si:ch211-121a2.2-201	1527	449aa	ENSDARP00000005856.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7M1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145954.2	si:ch211-121a2.2-204	814	158aa	ENSDARP00000113272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7M0	-
ENSDART00000140166.2	si:ch211-121a2.2-202	515	148aa	ENSDARP00000112680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7M2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142600.2	si:ch211-121a2.2-203	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 562 bps,

Version

ENSDART00000142600.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.