Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:ch211-121a2.2 ENSDARG00000039682

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Description

si:ch211-121a2.2 [Source:ZFIN;Acc:ZDB-GENE-070705-21]

Location

Chromosome 20: 7,070,634-7,080,470 reverse strand.

GRCz11:CM002904.2

About this gene

This gene has 4 transcripts (splice variants), 138 orthologues and 46 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023677.10	si:ch211-121a2.2-201	1527	449aa	ENSDARP00000005856.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7M1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145954.2	si:ch211-121a2.2-204	814	158aa	ENSDARP00000113272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7M0	-
ENSDART00000140166.2	si:ch211-121a2.2-202	515	148aa	ENSDARP00000112680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7M2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142600.2	si:ch211-121a2.2-203	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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