Transcript: ENSDART00000123925.3 chchd6a-201

Description

coiled-coil-helix-coiled-coil-helix domain containing 6a [Source:NCBI gene (formerly Entrezgene);Acc:449542]

Location

Chromosome 23: 34,047,438-34,110,666 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 1096 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003206.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143933.3	chchd6a-205	1159	239aa	ENSDARP00000116560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q63ZW2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000176139.2	chchd6a-206	773	247aa	ENSDARP00000143276.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M6Z3Q6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000123925.3	chchd6a-201	708	194aa	ENSDARP00000112370.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143339.3	chchd6a-204	792	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000140977.3	chchd6a-203	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138142.2	chchd6a-202	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 708 bps, Translation length: 194 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000123925.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000123925.3 chchd6a-201

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Transcript: ENSDART00000123925.3 chchd6a-201

Summary

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