Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: chchd6a ENSDARG00000003206

.

Description

coiled-coil-helix-coiled-coil-helix domain containing 6a [Source:NCBI gene;Acc:449542]

Gene Synonyms

hm:zeh0124, zeh0124, zgc:91802

Location

Chromosome 23: 34,047,413-34,185,019 forward strand.

GRCz11:CM002907.2

About this gene

This gene has 6 transcripts (splice variants), 157 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143933.3	chchd6a-205	1159	239aa	ENSDARP00000116560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q63ZW2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000176139.2	chchd6a-206	773	247aa	ENSDARP00000143276.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2U3TWB2	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000123925.3	chchd6a-201	708	194aa	ENSDARP00000112370.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F621	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143339.3	chchd6a-204	792	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000140977.3	chchd6a-203	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138142.2	chchd6a-202	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

.

Summary

.

.