Transcript: ENSDART00000109248.4 SPEN-202

Description

spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]

Location

About this transcript

This transcript has 15 exons, is annotated with 97 domains and features, is associated with 910 variant alleles and maps to 169 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109248.4	SPEN-202	10999	3476aa	ENSDARP00000098999.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMN6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189161.1	SPEN-203	11706	2499aa	ENSDARP00000148656.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000185793.1	SPEN-204	408	135aa	ENSDARP00000150579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000141272.2	SPEN-201	599	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 10,999 bps, Translation length: 3,476 residues

Version

ENSDART00000109248.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.