Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SPEN ENSDARG00000074245

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Description

spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]

Location

Chromosome 23: 24,436,273-24,483,440 reverse strand.

GRCz11:CM002907.2

About this gene

This gene has 4 transcripts (splice variants), 216 orthologues, 8 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109248.4	SPEN-202	10999	3476aa	ENSDARP00000098999.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMN6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189161.1	SPEN-203	11706	2499aa	ENSDARP00000148656.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000185793.1	SPEN-204	408	135aa	ENSDARP00000150579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000141272.2	SPEN-201	599	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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