Transcript: ENSDART00000055295.8 cpt1a2b-201

Description

carnitine palmitoyltransferase 1A2b [Source:ZFIN;Acc:ZDB-GENE-050417-155]

Gene Synonyms

cpt1cb, si:dkey-16p21.4, zgc:112484

Location

About this transcript

This transcript has 4 exons, is associated with 486 variant alleles and maps to 91 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148763.3	cpt1a2b-202	2541	780aa	ENSDARP00000124943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EYD4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000178448.2	cpt1a2b-203	1608	535aa	ENSDARP00000144190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000055295.8	cpt1a2b-201	858	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 858 bps,

Version

ENSDART00000055295.8

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.