Transcript: ENSDART00000148763.3 cpt1cb-202

Description

carnitine palmitoyltransferase 1Cb [Source:ZFIN;Acc:ZDB-GENE-050417-155]

Gene Synonyms

si:dkey-16p21.4, zgc:112484

Location

About this transcript

This transcript has 19 exons, is annotated with 15 domains and features, is associated with 1174 variant alleles and maps to 126 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148763.3	cpt1cb-202	2541	780aa	ENSDARP00000124943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EYD4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000178448.2	cpt1cb-203	1608	535aa	ENSDARP00000144190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YAG3	-
ENSDART00000055295.8	cpt1cb-201	858	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 2,541 bps, Translation length: 780 residues

Version

ENSDART00000148763.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.