Transcript: ENSDART00000032355.7 zgc:56525-201

Description

zgc:56525 [Source:ZFIN;Acc:ZDB-GENE-040426-1060]

Gene Synonyms

zgc:77193

Location

About this transcript

This transcript has 10 exons, is annotated with 17 domains and features, is associated with 466 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000032355.7	zgc:56525-201	1843	411aa	ENSDARP00000032153.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QI79	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192998.1	zgc:56525-203	5436	411aa	ENSDARP00000151371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QI79	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137960.2	zgc:56525-202	471	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,843 bps, Translation length: 411 residues

Version

ENSDART00000032355.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.